Arribere JA, Kuroyanagi H, Hundley HA. mRNA Editing, Processing and Quality Control in Caenorhabditis elegans. Genetics. 2020 Jul;215(3):531-568. doi: 10.1534/genetics.119.301807.

Glover ML, Burroughs AM, Monem PC, Egelhofer TA, Pule MN, Aravind L, Arribere JA. NONU-1 encodes a conserved endonuclease required for mRNA translation surveillance. Cell Rep. 2020 Mar 31;30(13):4321-4331.e4. doi: 10.1016/j.celrep.2020.03.023.

Schiksnis E, Nicholson A, Modena M, Pule M, Arribere J, Pasquinelli A. Auxin-independent depletion of degron-tagged proteins by TIR1. MicroPubl Biol. 2020 Jan 28;2020:10.17912/micropub.biology.000213. doi: 10.17912/micropub.biology.000213.

Pule MN, Glover ML, Fire AZ, Arribere JA. Ribosome clearance during RNA interference. RNA. 2019 Aug;25(8):963-974. doi: 10.1261/rna.070813.119.

Cenik ES, Meng X, Tang NH, Hall RN, Arribere JA, Cenik C, Jin Y, Fire A. Maternal Ribosomes Are Sufficient for Tissue Diversification during Embryonic Development in C. elegans. Dev Cell. 2019 Mar 25;48(6):811-826.e6. doi: 10.1016/j.devcel.2019.01.019.

Arribere JA, Fire AZ. Nonsense mRNA suppression via nonstop decay. Elife. 2018 Jan 8;7. pii: e33292. doi: 10.7554/eLife.33292.

Botham CM, Arribere JA, Brubaker SW, Beier KT. Ten simple rules for writing a career development award proposal. PLoS Comput Biol. 2017 Dec 14;13(12)

Ahn HW, Tucker JM, Arribere JA, Garfinkel DJ. Ribosome Biogenesis Modulates Ty1 Copy Number Control in Saccharomyces cerevisiae. Genetics. 2017 Dec;207(4):1441-1456.

Arribere JA, Cenik ES, Jain N, Hess GT, Lee CH, Bassik MC, Fire AZ. Translation Readthrough Mitigation. Nature. 2016 Jun 30;534(7609):719-23.

Saha A, Mitchell JA, Nishida Y, Hildreth JE, Arribere JA, Gilbert WV, Garfinkel DJ. A trans-dominant form of Gag restricts Ty1 retrotransposition and mediates copy number control. J Virol. 2015 Apr;89(7):3922-38.

Arribere JA, Bell RT, Fu BX, Artiles KL, Hartman PS, Fire AZ. Efficient marker-free recovery of custom genetic modifications with CRISPR/Cas9 in Caenorhabditis elegans. Genetics. 2014 Nov;198(3):837-46.

Arribere JA, Gilbert WV. Roles for Transcript Leaders in Translation and mRNA Decay Revealed by Transcript Leader Sequencing. Genome Res. 2013 Jun;23(6):977-87.

Arribere JA, Doudna JA, Gilbert WV. Reconsidering Movement of Eukaryotic mRNAs Between Polysomes and P bodies. Mol Cell. 2011 Dec 9;44(5):745-58.

Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG. Rbfox-Regulated Alternative Splicing is Critical for Zebrafish Cardiac and Skeletal Muscle Functions. Dev Biol. 2011 Nov 15;359(2):251-61.

Das D, Clark TA, Schweitzer A, Yamamoto M, Marr H, Arribere J, Minovitsky S, Poliakov A, Dubchak I, Blume JE, Conboy JG. A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing. Nucleic Acids Res. 2007;35(14):4845-57.