The Arribere Lab
The Arribere Lab

Publications

For a complete, updated list of publications, as well as links to each publication, please visit pubmed here.

 

Arribere JA, Fire AZ. Nonsense mRNA suppression via nonstop decay. Elife. 2018 Jan 8;7. pii: e33292. doi: 10.7554/eLife.33292.

Botham CM, Arribere JA, Brubaker SW, Beier KT. Ten simple rules for writing a career development award proposal. PLoS Comput Biol. 2017 Dec 14;13(12)

Ahn HW, Tucker JM, Arribere JA, Garfinkel DJ. Ribosome Biogenesis Modulates Ty1 Copy Number Control in Saccharomyces cerevisiae. Genetics. 2017 Dec;207(4):1441-1456.

Arribere JA, Cenik ES, Jain N, Hess GT, Lee CH, Bassik MC, Fire AZ. Translation Readthrough Mitigation. Nature. 2016 Jun 30;534(7609):719-23.

Saha A, Mitchell JA, Nishida Y, Hildreth JE, Arribere JA, Gilbert WV, Garfinkel DJ. A trans-dominant form of Gag restricts Ty1 retrotransposition and mediates copy number control. J Virol. 2015 Apr;89(7):3922-38.

Arribere JA, Bell RT, Fu BX, Artiles KL, Hartman PS, Fire AZ. Efficient marker-free recovery of custom genetic modifications with CRISPR/Cas9 in Caenorhabditis elegans. Genetics. 2014 Nov;198(3):837-46.

Arribere JA, Gilbert WV. Roles for Transcript Leaders in Translation and mRNA Decay Revealed by Transcript Leader Sequencing. Genome Res. 2013 Jun;23(6):977-87.

Arribere JA, Doudna JA, Gilbert WV. Reconsidering Movement of Eukaryotic mRNAs Between Polysomes and P bodies. Mol Cell. 2011 Dec 9;44(5):745-58.

Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG. Rbfox-Regulated Alternative Splicing is Critical for Zebrafish Cardiac and Skeletal Muscle Functions. Dev Biol. 2011 Nov 15;359(2):251-61.

Das D, Clark TA, Schweitzer A, Yamamoto M, Marr H, Arribere J, Minovitsky S, Poliakov A, Dubchak I, Blume JE, Conboy JG. A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing. Nucleic Acids Res. 2007;35(14):4845-57.

 

Department of MCD Biology University of California, Santa Cruz Sinsheimer Labs, Room 424 1156 High Street Santa Cruz, CA 95060 Lab Phone: 831.459.2612